Yun, Goro and their robot Jet Jaguar clash with a hostile pterosaur-like kaiju, Rodan. Mei travels to Tokyo to meet with a world-renowned researcher.

Salunga emerges from the depths of the Upala research station shrouded in red dust. Meanwhile, Yun observes Anguirus exhibiting an uncanny ability.

Mei discovers a mysterious code in Professor Ashihara's research. The Otaki crew confront Anguirus as part of the city's extermination efforts.

Before heading to the Super Dimension Calculator, BB offers Mei a view of the Singular Point. The Otaki crew leave for Tokyo to destroy Godzilla.

Mei learns of a large explosion triggered by Ashihara's calculator long ago. Kanoko gives Matsubara the Orthogonal Diagonalizer to use against Godzilla.