MacGyver goes to the mountains to lead four ex-gangster teens on a Phoenix Foundation funded rehabilitation trip. When he gets there, he finds that this task may be a little more complicated then he thought. All of the kids are very rebellious and one of them has a bad grudge against another one. A couple of days later when MacGyver is returning with the kids, their plane crashes in the middle of the wilderness and one of them is injured. Now, MacGyver must fix the plane and help the kids work out their differences so they can save their friend.

MacGyver's fishing trip is cut short when he meets a very pregnant woman whose husband is out to kill her. Accidentally, she found out that his half-way home for ex-cons is really a recruiting place for new crimes. Mac and the woman are chased into a warehouse where they are trapped.

When MacGyver is sent to rescue an American pilot held in Central America for supposed espionage, his wargame-trained daughter tags along, but she didn't quite come prepared for the real thing. MacGyver must now rescue the pilot while keeping his daughter safe from the soldiers.