The reborn Team Kakashi continues to investigate the recent attack by Kabuto and the reincarnated shinobi when Naruto gets swallowed by a giant snake, but manages to escape using shadow clones, and accidentally ingests snakes that were present in the pond which Kabuto uses to summon Hidan.

Itachi joins the ANBU and is quickly promoted to captain. But he must report directly to Danzo, and is placed as a double agent to observe the Uchiha clan, who are in the midst of planning a coup d’état. With dissatisfaction rising within the clan, the Uchiha ultimately decide to carry out their revolt, and the fateful night approaches.