Train, better known as Black Cat, completes another mission for Chronos, and is informed of his next mission. Later, Sven is inside a restaurant, planning how to catch his next target. A parade is happening outside, celebrating a new governor coming into office. One of the waitresses informs Sven that the new governor is also a gangster, the same man that Sven is targeting. A party is held that night, and Sven learns he isn't the only one targeting the governor. The infamous Black Cat is as well, though with a very different objective...

Sven goes back to his usual sweeper to find some more work. Not long after, a girl runs in with a couple of thugs not far behind. Sven steps in and drives the thugs off. After talking to the girl, he finds out that the thugs have her little sister hostage, and she has the ransom money for her sister's return. She offers Sven the money if he can get her sister back. Will Sven take the job?

As Sven begins to put his plan into action, to save Eve from Torneo, Black Cat is right behind him. Meanwhile in the Torneo's basement the thief Rinslet discovers a shocking truth about Eve. Back upstairs Sven and Black Cat make their own attempts to get Eve, with their own reasons. Who will get Eve and what is the shocking truth?

Coming back from his first failed attempt to bring back Train, Creed returns. With Train fully turning his back on Chronos it is all up to Creed. Since his first attempts failed Creed uses his magic to kidnap Train. When that doesn't work he goes for the thing Train cares about the most... Saya. Can Train stop him?

Train awakens in Sven and Eve's company. Confused and saddened, he has to decide what course of action to take with his life next. As Sven goes out to get supplies, Eve comes to realize that she has to repent for her sins as well. Meanwhile, someone from Chronos is close by, looking to capture Eve.

A man named Ganza is terrifying the residents of a town, coming out at night and killing people with his bare hands. Two members of the Apostles of the Stars attempt to recruit him to their group, but Ganza refuses, he'd much rather spend his time killing innocent people. Meanwhile, Train and the others learn of Ganza. Train, Sven and Eve come up with a plan to lure out and capture Ganza, but their plan doesn't turn out the way they had hoped.

A man named Woodney, claiming to be the legendary assassin, Black Cat, meets Eve. Eve helps him out of a potentially dangerous situation. Soon afterwards, a member of the Apostles of the Stars, Durham, appears, eager to kill Black Cat. Train saves Eve and Woodney, and then confronts the gunman. Who is the superior gunman, Train or Durham?

Train learns where the Apostles of the Stars base is, and leaves the group to go after Creed. Sven and the others quickly follow after Train, desperate to prevent him from doing anything foolish. Meanwhile, three members of Chronos infiltrate Creed's base, determined to finish off the Apostles of the Stars once and for all.

Train travels toward a port where he can get a boat to reach Kraken Island, where the Apostles of the Stars are. He decides to take a faster route, and goes through a dangerous canyon. Train soon collapses, and later awakens in a strange house. He meets a girl who looks remarkably like Saya. He stays there for a while, and learns more about this mysterious girl called Saki, and of the troubles that confront her.

The war against the Apostles of the Stars continues. While Sven fights against Preta Ghoul, Train confronts Creed. Sephiria informs Train that the only way to defeat Creed is with a titanium bullet. Creed, having given up on Train joining him, is determined to kill him. Who will win in this climactic battle?

As Eden rains down nanomachines on a city full of people, everyone else tries to think of a plan to rescue Eve. Chronos and the Apostles of the Stars team up with Train and the others, and come up with a plan to lure Eden to the ground. Will they succeed?

As Chronos and remaining members of the Apostles of the Stars fight the monsters outside Eden, Train and Sven go inside to rescue Eve, determined to save her even if it would cost them their lives. While Sven tries to get close to Eve, Train has to face off against his own inner demons first.