Ahsoka and Jedi Master Luminara escort the captured notorious Separatist leader Nute Gunray to Coruscant so he can stand trial for his crimes. However, they are unaware that Count Dooku has sent his assassin, Asajj Ventress, to free their captive. With the help of Senate Commandos, the Jedi have to thwart Ventress's efforts to free their prisoner, despite the traitorous plans of Senate Guard Captain Argyus.

Cad Bane has been hired by Darth Sidious to steal a Jedi holocron. The holocrons -- data storage systems that can only be opened through the Force -- are protected within a vault inside the Jedi Temple. Recruiting a changeling posing as a Jedi in his plot, Bane infiltrates the building's security systems and leads Anakin, Obi-Wan and Ahsoka on a chase.

Duchess Satine travels from Mandalore to Coruscant on a diplomatic mission, with Obi-Wan Kenobi, Anakin Skywalker and a team of troopers to defend her. As her luxurious starship, Coronet, makes its way through hyperspace, the Jedi must stop several assassination attempts, and Anakin discovers that Obi-Wan and the Duchess have a history together.