After police pull over a driver and arrest him for a concealed weapon, a car crashes into their patrol car with a dead man behind the wheel. The arrested man turns out to be Russian and Homeland Security claim he was working for them. The Russian is linked to an old case that Mike Franks worked on. Mike comes out of retirement to put the Russian behind bars.

When an honored Marine veteran is found dead in a hotel, the NCIS team must find out what happened to him. Soon they realize that the Marine didn't commit suicide and that he was a homeless man. After going through his stuff, they find compromising evidence against him, and Gibbs is determined to prove the man's innocence.

When a high-level Marine intelligence officer is found murdered in a small motel room, the NCIS team must find the person who murdered him. After discovering that the person was dead for already three days, and that the town authorities already "investigated" the crime, Gibbs is determined to solve the case, which could be related to a terrorist cell, and not let the town authorities get in his way.

When a supposedly frozen to death Marine turns out alive on Ducky's autopsy table, the NCIS team has to find out about the victim's movements last few days to uncover what happened to him and who left him for dead. As the investigation progresses, the team learns about the victim's trip to Baghdad via a private cargo plane and discovers a link to Gibbs' past.

When Jenny has to attend an overseas conference, Gibbs is made acting director, but he prefers to ignore his duties and lead the investigation of the murder of a man, who was found dead in a taxi headed to the NCIS headquarters.

The NCIS team uncovers a huge secret, as their mission to capture La Grenouille comes to an explosive and deadly conclusion.

Gibbs finds himself emotionally challenged when he agrees to investigate a crime connected to a friend of his daughter, who passed away years ago, and the investigation leads to a shocking conclusion.

When a petty officer is found murdered, Gibbs learns about the mysterious connection between the disbanding of his team and the case.

The body of a Marine leads Gibbs and McGee to the NCIS OSP division in Los Angeles, where a murder investigation quickly climbs to a matter of national security in which the two offices must work together to resolve. Meanwhile, Tony begins to snoop into Ziva's personal life.

With the appearance of Mossad agent Michael Rivkin, Tony is forced to question Ziva’s loyalty to NCIS. Meanwhile, in Los Angeles, Special Agent Callen goes undercover to try to catch a terrorist cell while OSP psychologist Nate Getz discovers the startling truth about Gibbs and Special Agent Lara Macy’s relationship.