Kaito Yashio and his friend Akiho Senomiya are the remaining members of their school's Robotics Club. After Akiho hands in a budget request to the staff room, both she and Kaito, who spends his time playing games on his PokeCon device, visit an old hangar containing a large robot the Robotics Club has been working on since its foundation, Gunvarrel, based on a popular robot anime whose final episode was never aired. The next day, the vice-principal agrees to give the Robotics Club their proposed budget on the condition that they win a robot tournament taking place in two week's time, with the club to be disbanded should they lose. As Kaito and Akiho contemplate if they can pull off such a feat, a mysterious girl is seen making a report.

As the robots continue to run rampant in Tokyo, Kona explains to Kaito that the login to their control panel has been altered by the hackers to require they defeat a Kill-Ballad CPU opponent. Struggling to beat the opponent, Kaito decides to try and force his slow-mo by pushing his body to its limits, but to no avail. Kona soon founds out the person behind the hack was one of the members from her development circle, Maguyan, who claims he was forced to do it as his family was taken hostage. Kaito soon realises that Maguyan has in fact been brainwashed. As Kona hears the support of her friends from the Robotics Club, she explains how she created Kill-Ballad to keep Gunvarrel, and her mother's memories, alive. As the police show at Kona's doorstep, Akiho, Junna and Subaru help lure them away, buying Kaito and Kona some time to beat the Kill-Ballad opponent.

As Sawada's first shot has no effect on Misaki and he starts unloading before being tackled by Kaito who urges Akiho to chase after Misaki. As the Kagome, Kagome tune soon starts playing from the Arena's PA, Akiho watches in disbelief as Misaki boards the Sumeragi and begins reeking havoc within the expo, by destroying the other robots. As the Sumeragi sets its sights on GunBuild-2, Akiho tries in vain to defend it and has another EMS seizure upon its destruction, followed by Kaito upon seeing Akiho's state before Misaki escapes. In the aftermath, whilst getting Akiho to safety, Kaito discovers a massive obelisk has appeared out of nowhere, which Akiho deduces to be the space elevator from the leaked Gunvarrel episode. As the Haneda and Narita Airports are shut down due to a massive solar flare which is blamed for the Expo's attack, Airi has a mysterious visitor in her hospital room as the Airi AI begins singing Kagome, Kagome from her Poke-Com.

Kaito arrives before Misaki, with the others helping to divert the missiles she fires using AR decoys, although Kaito is forced to use the Slow-Mo and sacrifice one of his pile bunkers to dodge the last one. Kaito manages to get up close to Misaki's Sumeragi and use the Slow-Mo to attack her with the other pile bunker. However, this knocks Misaki out and allows Kimijima to take full control of her as he divides the Sumeragi into a more mobile unit. After locking down the launch sequence, despite Nao and the other adults reclaming the control room, Kimijima launches an attack at the others forcing them to seperate, which leaves the Super Gunbuild-1 with only five minutes of power. Just then, Kona receives a program from Sawada that will erase Kimijima if they can get his avatar in the PokeCom's view, although it requires a reboot which leaves Kaito vulnerable.