Boruto and the others work together to obtain the Reverse Scale from Garaga. But the battle proves difficult, as Garaga has the power to sense the location of its enemies and turn them into stone. In the midst of battle, the team notices inconsistencies in Garaga's moves and comes up with a successful strategy to subdue him. Boruto is seized with a strange feeling and makes Garaga a proposition.

Boruto runs into his teacher Sasuke, who’s returned to the village after a long absence. After listening to Boruto explain the village’s new holiday, Sasuke recalls the time he spent with his father, Fugaku, and his beloved brother Itachi, and decides to spend time with Sarada.

Naruto and Shikamaru deliberate on the results of the Chunin Exam that were left unsettled due to the Otsutsuki attack. Sasuke returns, looking for clues about the Otsutsuki Clan.

Kakashi goes to the post office—disguised as Sukea, a freelance journalist—to observe Team 25, whose mission is to assist with sorting mail. Houki Taketori, Hako Kuroi, and Renga Kokubou are genin and Boruto's former classmates. As a team, they haven't distinguished themselves, so the missions they are assigned to always consist of simple tasks. Furthermore, they lack teamwork. To find the reason for this, Kakashi decides to talk to Houki, who for some reason dresses just like him.

Boruto and Sasuke end up staying in the Hidden Leaf under the watchful eyes of Naruto and Jiraiya. At first, Boruto feels uncomfortable being with Naruto, but gradually warms up to him. Meanwhile, a group of genin—Sakura, Hinata, and Neji—are summoned for duty along with their chunin leader, Shikamaru. Boruto and Naruto head to the designated meeting place and find something unexpected.

Enko Onikuma—one of Boruto's former classmates and a member of Team 40— was possessed by a Summoning Beast as a child. Now, she can manifest its enormous power. But lately, she hasn't been able to control her power, hindering her work on missions. Meanwhile, Ibiki Morino approaches Enko and tells her that she'll be working under him going forward.

Boruto's new mission is to guard Tento, who is obsessed with ninja and collecting X Cards. He begs Boruto to teach him ninja skills, and Boruto thinks this will be a good opportunity to knock some sense into Tento. Meanwhile, the Mujina Gang, which had been laying low after Team 7’s infiltration mission at Hozuki Castle, rears its ugly head.

Boruto and Team 7 are tasked with a mission to find a missing researcher of a medical equipment company in a distant nation. Mugino, a jonin who has a keen sense of location, comes on board to guide and assist Team 7. Without wasting any time, Boruto and the team start their mission with Mugino.

Delta forces her way into the Leaf Village to take Kawaki back and appears before Boruto and the others. Naruto confronts her to protect Boruto, Himawari and Kawaki. She attacks Naruto with Scientific Ninja Tools that have been implanted into her heavily modified body. In response, Naruto unleashes the power of the Nine Tails, and a fierce clash ensues!

Those with a Karma gradually lose control of their minds and bodies as they undergo Otsutsukification. Naruto convenes a Five Kage Summit to discuss what they should do about Boruto’s condition, as well as Cord, one of the leaders of Kara.

Kawaki starts to believe that being a genin is not for him. The Seventh Hokage gives him a last shot and assigns him to join Shikadai and Cho-Cho on a mission to protect Mozuku, from the Land of Calm Seas, and escort him back to his homeland. Will Kawaki be able to cooperate with his comrades and fulfill the mission this time? Meanwhile, Team 7 is on another mission and they pass a group who seem to be ninja in disguise…

Now that their ship has been repaired, Boruto and the others will soon be leaving the island of shipbuilders. Ikada, now friends with Boruto, promises to achieve his dream and pay him a visit. But then Ikada’s sister Seiren appears before him and tries to drag him back home. When Ikada left home, Seiren was his only ally, so he is sad to see her so unwilling to understand his feelings. Meanwhile, Buntan, Hebiichigo, and Kyoho wait for the ship to depart. They had been promised reduced sentences for their work, but they learn that they won’t be rewarded as much as they thought!

Ikada returns home after learning that his sister has been severely injured in battle. He spends the next few days looking after her and is visited by Funamushi’s son Kobuna. Kobuna asks Ikada if he will join the fight. Ikada tells him that he is not suited for battle. Despite his feelings, his father Araumi and the other members of the Funato Clan are annoyed that he isn’t joining the fight.

The Academy students are at the hospital to visit Hana, who struggles to remember the day of the attack. At the Hokage's palace, Kawaki is relieved of his mission for not reporting the presence of the assassin in time.

While Boruto and the others are forced to participate in Ouga’s experiments, Sarada and her team investigate Boruto’s disappearance and discover the existence of a suspicious individual.

Meanwhile, Boruto is shocked to discover the identity of someone who may be working for Ouga. Just then, a test subject is found dead—killed for reasons that have nothing to do with the experiment.

In order to gain the strength to fight Code, Boruto invites Kawaki to train, along with Sarada and Mitsuki. Unfortunately, because Kawaki is in a rush, they end up arguing about their training methods.

Meanwhile, at Boro’s facility, Eida has awakened. Eida is another one of Amado’s creations who has the power of the Senrigan, which allows her to see events in the present and the past. Code is powerless against her other ability…