After watching a TV show, starring Captain Heifer and his Heifer Farms Brand Yogurt, Billy asks Grim to turn him into a superhero with the power of squeaking and throwing yogurt from his armpits. With his wish granted, Billy goes to outer space to fight the Evil Empire, but the planet he visits is mostly inhabited. Despite being free of Billy, Grim still has to deal with Billy's equally dumb father, Harold. After Billy fills the alien planet with yogurt, he returns home to be "normal".

Trying to get revenge at Mandy for bossing them all the time, Billy and Grim put her in the "Mask of the Beast". Mandy must be nice and friendly while wearing the mask, or else she will become a hideous monster. Failing to remove the mask herself, and struggling to be kind to Billy and Grim, Mandy gradually turns into the beast. Billy and Grim ask Mandy to smile while she gives them a sponge bath, but this turns out to be too hard for Mandy. She fully transforms into the beast and punishes them instead.

After Billy wakes up from another nightmare involving clowns, he is more terrified than ever towards them, so Mandy and Grim try to cure him of this clown-a-phobia. Mandy asks Grim to bring to life a clown's head made on paper mache to entertain Billy, but the spell does not seem to work. They dress up as clowns in an attempt to look harmless. After consulting with his imaginary "Inner Frat Boy", Billy changes his feeling from being afraid to being angry at clowns, and attacks them with Grim's scythe. Billy is cured of his fear, but the paper mache clown attacks and eats them.

When Billy and Mandy's school is preparing for a big game, Mindy entrusts the care of the school's mascot, Fluffy Cat, to Billy, to protect him from being kidnapped by the rival team, the Booty Heads. At Billy's house, Fluffy Cat is a disaster, so Billy's mom throws him into the basement, where the cat gets inside Grim's trunk, absorbing its powers. A giant Fluffy Cat appears just before the game wreaking havoc.

Billy and Mandy find a supernatural zipper from Grim's robe, and while Billy uses it to create mischief, Mandy gets herself in a sticky situation.

After Grim's scythe fails to open a portal, he decides to sharpen it, but the blade breaks. Billy, Mandy and Grim go to the Underworld to meet F (a parody of James Bond's "Q"), who is in charge of the Underworld secret gadgets. F unveils Scythe 2.0, which is a new-and-improved sentient, autonomous, thinking and feeling computerized scythe, that Grim uses while his classic scythe is being repaired. When Mandy tells Grim to do his usual humiliating chores, Grim delegates the work to Scythe 2.0, which rebels and decides to reap by itself, starting with Billy and Mandy. Grim saves the kids, takes Scythe 2.0 back to the Underworld, and returns with his old scythe.

When Billy's parents leave for their second honeymoon, Billy is left alone at the worst possible moment, since he has invited Principal Goodvibes over to dinner so he can recommend him into Rollington Academy for the Gifted. Billy's dad suggest Billy to use Eris, the goddess of chaos, and Hoss Delgado, spectral exterminator, as his substitute parents during the dinner. The dinner is a disaster with Delgado terrorizing Goodvibes, and Eris unleashing giant alien zombie lobsters. Goodvibes forcefully recommends Billy into Rollington Academy, which, as it turns out, is actually a military school.

When Nergal goes to visit Billy's family (his in-laws) for the weekend, he ends up staying with them over a year. When Billy finally asks his uncle to leave, Nergal says he cannot return home because he is a complete failure, having lost at a board game 599 times in a row against his own family, and experiencing constant disappointment elsewhere. Billy and Grim tell him to not worry about being a failure, but to embrace it. After training with Billy and Grim, Nergal returns home and he finally wins at the board game, but he also makes a crack in the ceiling and his home starts filling with lava.

A scene of Endsville two weeks into the future shows a dystopian world ruled by the "Lord of Horror", who wields the all-powerful artifact known as "Horror's Hand". At the same time, two robotic replicas of Billy and Mandy are sent into the past, to stop the real Billy and Mandy from interfering with the current events.orror's Hand to rule the world.